R. Anderson and R. May, Population biology of infectious diseases: Part I, Nature, vol.25, issue.5721, pp.361-367, 1979.
DOI : 10.1016/0022-5193(66)90161-5

R. Poulin, Parasite faunas of freshwater fish: The relationship between richness and the specificity of parasites, International Journal for Parasitology, vol.27, issue.9, pp.1091-1098, 1997.
DOI : 10.1016/S0020-7519(97)00070-2

B. Roche, A. P. Dobson, J. Guégan, and P. Rohani, Linking community and disease ecology: the impact of biodiversity on pathogen transmission, Philosophical Transactions of the Royal Society B: Biological Sciences, vol.2, issue.5958, pp.2807-2813, 2012.
DOI : 10.1186/1475-2875-2-32

M. E. Woolhouse, L. H. Talyor, and D. Haydon, Population Biology of Multihost Pathogens, Science, vol.292, issue.5519, pp.1109-1112, 2001.
DOI : 10.1126/science.1059026

H. Mccallum and A. Dobson, Detecting disease and parasite threats to endangered species and ecosystems, Trends in Ecology & Evolution, vol.10, issue.5, pp.190-194, 1995.
DOI : 10.1016/S0169-5347(00)89050-3

R. E. Gozlan, E. J. Peeler, M. Longshaw, S. St-hilaire, and S. W. Feist, Effect of microbial pathogens on the diversity of aquatic populations, notably in Europe, Microbes and Infection, vol.8, issue.5, pp.1358-1364, 2006.
DOI : 10.1016/j.micinf.2005.12.010

R. D. Holt, A. P. Dobson, M. Begon, R. G. Bowers, and E. M. Schauber, Parasite establishment in host communities, Ecology Letters, vol.124, issue.0, pp.837-842, 2003.
DOI : 10.1086/285973

B. Okamura and S. W. Feist, Emerging diseases in freshwater systems, Freshwater Biology, vol.21, issue.Suppl. 1, pp.627-637, 2011.
DOI : 10.1111/j.1365-2427.2011.02578.x

K. M. Mitchell, T. S. Churcher, T. W. Garner, and M. C. Fisher, Persistence of the emerging pathogen Batrachochytrium dendrobatidis outside the amphibian host greatly increases the probability of host extinction, Proceedings of the Royal Society B: Biological Sciences, vol.77, issue.1, pp.329-334, 2008.
DOI : 10.1007/s00442-006-0558-1

S. Gandon, The curse of the pharoah hypothesis, Proceedings of the Royal Society B: Biological Sciences, vol.265, issue.1405, pp.1545-1552, 1998.
DOI : 10.1098/rspb.1998.0470

B. Roche, J. M. Drake, and P. Rohani, The curse of the Pharaoh revisited: evolutionary bi-stability in environmentally transmitted pathogens, Ecology Letters, vol.56, issue.25, pp.569-575, 2011.
DOI : 10.1111/j.1461-0248.2011.01619.x

B. A. Walther and P. W. Ewald, Pathogen survival in the external environment and the evolution of virulence, Biological Reviews, vol.96, issue.10, pp.849-869, 2004.
DOI : 10.1016/S0140-6736(60)91693-7

P. W. Ewald, Evolution of infectious disease, pp.15-22, 1994.

S. Bonhoeffer, R. E. Lenski, and D. Ebert, The Curse of the Pharaoh: The Evolution of Virulence in Pathogens with Long Living Propagules, Proceedings of the Royal Society B: Biological Sciences, vol.263, issue.1371, pp.715-721, 1996.
DOI : 10.1098/rspb.1996.0107

M. R. Whiles, Assessing ecological responses to catastrophic amphibian declines: Patterns of macroinvertebrate production and food web structure in upland Panamanian streams, Limnol. Oceanogr, vol.54, pp.331-343, 2009.

M. C. Fisher, Emerging fungal threats to animal, plant and ecosystem health, Nature, vol.3, issue.7393, pp.186-194, 2012.
DOI : 10.1038/nature10947
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3821985

C. D. Harvell, Emerging Marine Diseases--Climate Links and Anthropogenic Factors, Science, vol.285, issue.5433, pp.1505-1510, 1999.
DOI : 10.1126/science.285.5433.1505
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.558.8803

K. E. Jones, Global trends in emerging infectious diseases, Nature, vol.309, issue.7181, pp.990-993, 2008.
DOI : 10.1038/nature06536

W. F. Frick, An Emerging Disease Causes Regional Population Collapse of a Common North American Bat Species, Science, vol.329, issue.5992, pp.679-682, 2010.
DOI : 10.1126/science.1188594

A. G. Murray and E. J. Peeler, A framework for understanding the potential for emerging diseases in aquaculture, Preventive Veterinary Medicine, vol.67, issue.2-3, pp.223-235, 2005.
DOI : 10.1016/j.prevetmed.2004.10.012

R. A. Elston, L. Harrell, and M. T. Wilkinson, Isolation and in vitro characteristics of chinook salmon (Oncorhynchus tshawytscha) rosette agent, Aquaculture, vol.56, issue.1, pp.1-21, 1986.
DOI : 10.1016/0044-8486(86)90286-3

J. J. Rowley, Impacts of mesomycetozoean parasites on amphibian and freshwater fish populations, Fungal Biology Reviews, vol.27, issue.3-4, pp.100-111, 2013.
DOI : 10.1016/j.fbr.2013.09.002

R. E. Gozlan, Current ecological understanding of fungal-like pathogens of fish: what lies beneath?, Frontiers in Microbiology, vol.5, pp.1-16, 2014.
DOI : 10.3389/fmicb.2014.00062
URL : https://hal.archives-ouvertes.fr/hal-01321245

R. Gozlan, Pathogens: Monitoring fungal infections in fish, Nature, vol.11, issue.7399, p.446, 2012.
DOI : 10.1038/485446d

K. D. Arkush, S. Frasca, and R. P. Hedrick, Pathology Associated with the Rosette Agent, A Systemic Protist Infecting Salmonid Fishes, Journal of Aquatic Animal Health, vol.8, issue.1, pp.1-11, 1998.
DOI : 10.1073/pnas.93.21.11907

R. K. Paley, D. Andreou, K. S. Bateman, and S. W. Feist, Isolation and culture of Sphaerothecum destruens from Sunbleak (Leucaspius delineatus) in the UK and pathogenicity experiments in Atlantic salmon (Salmo salar), Parasitology, vol.139, issue.07, pp.904-914, 2012.
DOI : 10.1577/1548-8667(1998)010<0397:EIORTW>2.0.CO;2

K. D. Arkush, M. Leonel, M. A. Adkison, and R. P. Hedrick, Observations on the Life Stages of Sphaerothecum destruens n. g., n. sp., a Mesomycetozoean Fish Pathogen Formally Referred to as the Rosette Agent, The Journal of Eukaryotic Microbiology, vol.17, issue.6, pp.430-438, 2003.
DOI : 10.1002/(SICI)1097-010X(19990101)283:1<31::AID-JEZ5>3.0.CO;2-Q

D. Andreou, R. E. Gozlan, and R. Paley, 10368 | DOi: 10 Temperature influence on production and longevity of Sphaerothecum destruens zoospores, J. Parasitol, vol.5, issue.95, pp.1539-1541, 1038.

R. E. Gozlan, C. M. Whipps, D. Andreou, and K. D. Arkush, Identification of a rosette-like agent as Sphaerothecum destruens, a multi-host fish pathogen, International Journal for Parasitology, vol.39, issue.10, pp.1055-1058, 2009.
DOI : 10.1016/j.ijpara.2009.04.012

R. E. Gozlan, S. St-hilaire, S. W. Feist, P. Martin, and M. L. Kent, Biodiversity: Disease threat to European fish, Nature, vol.435, issue.7045, p.1046, 2005.
DOI : 10.1038/4351046a

D. Andreou, K. D. Arkush, J. Guégan, and R. E. Gozlan, Introduced Pathogens and Native Freshwater Biodiversity: A Case Study of Sphaerothecum destruens, PLoS ONE, vol.24, issue.5, p.36998, 2012.
DOI : 10.1371/journal.pone.0036998.t003

R. M. Anderson and R. M. May, Infectious Diseases of Humans: Dynamics and Control at < http://books.google.com/ books?id= HT0-xXBguQC&pgis= 1> Date of Access, pp.2-3, 1992.

C. Codeco, Endemic and epidemic dynamics of cholera: the role of the aquatic reservoir, BMC Infectious Diseases, vol.15, issue.1, p.1, 2001.
DOI : 10.1023/A:1007541317104

B. Roche, Water-borne transmission drives avian influenza dynamics in wild birds: The case of the 2005???2006 epidemics in the Camargue area, Infection, Genetics and Evolution, vol.9, issue.5, pp.800-805, 2009.
DOI : 10.1016/j.meegid.2009.04.009
URL : https://hal.archives-ouvertes.fr/pasteur-00457555

C. Carey, Experimental Exposures of Boreal Toads (Bufo boreas) to a Pathogenic Chytrid Fungus (Batrachochytrium dendrobatidis), EcoHealth, vol.55, issue.Suppl, pp.5-21, 2006.
DOI : 10.1007/s10393-005-0006-4

D. Ebert, C. D. Zschokke-rohringer, and H. J. Carius, Dose effects and density-dependent regulation of two microparasites of Daphnia magna, Oecologia, vol.122, issue.2, pp.200-209, 2000.
DOI : 10.1007/PL00008847

D. Sarkar, Lattice: Multivariate Data Visualization with R, pp.13-33, 2008.
DOI : 10.1007/978-0-387-75969-2

L. H. Monteiro, J. B. Sasso, and J. G. Chaui-berlinck, Continuous and discrete approaches to the epidemiology of viral spreading in populations taking into account the delay of incubation time, Ecological Modelling, vol.201, issue.3-4, pp.553-557, 2007.
DOI : 10.1016/j.ecolmodel.2006.09.027

P. T. Johnson and D. W. Thieltges, Diversity, decoys and the dilution effect: how ecological communities affect disease risk, Journal of Experimental Biology, vol.213, issue.6, pp.961-970, 2010.
DOI : 10.1242/jeb.037721

E. J. Peeler and S. W. Feist, Human intervention in freshwater ecosystems drives disease emergence, Freshwater Biology, vol.69, issue.4, pp.705-716, 2011.
DOI : 10.1111/j.1365-2427.2011.02572.x

A. Karvonen, P. Rintamäki, J. Jokela, and E. T. Valtonen, Increasing water temperature and disease risks in aquatic systems: Climate change increases the risk of some, but not all, diseases, International Journal for Parasitology, vol.40, issue.13, pp.1483-1488, 2010.
DOI : 10.1016/j.ijpara.2010.04.015

T. L. Leung and A. E. Bates, More rapid and severe disease outbreaks for aquaculture at the tropics: implications for food security, Journal of Applied Ecology, vol.1, issue.1, pp.215-222, 2013.
DOI : 10.1111/1365-2644.12017