The symbiotic habit: Princeton University press, 2010. ,
The biology of mutualism: ecology and evolution, 1988. ,
Transcriptome analyses to investigate symbiotic relationships between marine protists, Front Microbiol, vol.6, p.98, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01143962
Mutualistic associations of aphids and prokaryotes: biology of the genus Buchnera, Appl Environ Microbiol, vol.61, issue.1, p.1, 1995. ,
Symbiotic diversity in marine animals: the art of harnessing chemosynthesis, Nat Rev Microbiol, vol.6, issue.10, p.725, 2008. ,
Symbiosis specificity in the legumerhizobial mutualism, Cell Microbiol, vol.14, issue.3, pp.334-376, 2012. ,
Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp, APS Nature, vol.407, issue.6800, p.81, 2000. ,
An insect symbiosis is influenced by bacterium-specific polymorphisms in outer-membrane protein a, Proc Natl Acad Sci, vol.105, issue.39, pp.15088-93, 2008. ,
Nutritional interactions in insect-microbial symbioses: aphids and their symbiotic bacteria Buchnera, Annu Rev Entomol, vol.43, issue.1, pp.17-37, 1998. ,
Lessons from a cooperative, bacterial-animal association: the Vibrio fischeri-Euprymna scolopes light organ symbiosis, Annu Rev Microbiol, vol.50, issue.1, pp.591-624, 1996. ,
Horizontal endosymbiont transmission in hydrothermal vent tubeworms, Nature, vol.441, issue.7091, p.345, 2006. ,
The biology of vestimentiferan tubeworms, Oceanogr Mar Biol Annu Rev, vol.48, pp.213-66, 2010. ,
Innate immune recognition of the microbiota promotes host-microbial symbiosis, Nat Immunol, vol.14, issue.7, p.668, 2013. ,
Knowing your friends: invertebrate innate immunity fosters beneficial bacterial symbioses, Nat Rev Microbiol, vol.10, issue.12, p.815, 2012. ,
Microbial symbiosis: patterns of diversity in the marine environment, Am Zool, vol.34, issue.1, pp.79-89, 1994. ,
Why bacteria matter in animal development and evolution, Bioessays, vol.32, issue.7, pp.571-80, 2010. ,
Symbiosis and the biodiversity of natural ecosystems. GAIA-Ecological Perspectives for, Science and Society, vol.4, issue.4, pp.227-260, 1995. ,
Metaorganisms in extreme environments: do microbes play a role in organismal adaptation? Zoology, 2018. ,
The ecology of deep-sea hydrothermal vents, 2000. ,
Microbial ecology of the dark ocean above, at, and below the seafloor, Microbiol Mol Biol Rev, vol.75, issue.2, pp.361-422, 2011. ,
Back-arc spreading systems: geological, biological, chemical, and physical interactions, Geophysical Monograph, vol.166, pp.185-231, 2006. ,
The biology of hydrothermal vents: ecology and evolution. Oceanographic Marine Bio Ann Reu, vol.29, pp.319-407, 1991. ,
Microorganisms as food resources at deep-sea hydrothermal vents, Limnol Oceanogr, vol.39, issue.1, pp.51-58, 1994. ,
Bathymodiolus (Bivalvia: Mytilidae) from hydrothermal vents on the Azores triple junction and the Logatchev hydrothermal field. Mid-Atlantic Ridge Veliger, vol.42, pp.218-266, 1999. ,
Conjugating effects of symbionts and environmental factors on gene expression in deep-sea hydrothermal vent mussels, BMC Genomics, vol.12, issue.1, p.530, 2011. ,
URL : https://hal.archives-ouvertes.fr/inserm-00642454
Nutritional relations of deep-sea hydrothermal fields at the mid-Atlantic ridge: a stable isotope approach. Deep-Sea Res I, Oceanogr Res Pap, vol.49, issue.2, pp.395-412, 2002. ,
A dual symbiosis shared by two mussel species, Bathymodiolus azoricus and Bathymodiolus puteoserpentis (Bivalvia: Mytilidae), from hydrothermal vents along the northern midAtlantic ridge, Environ Microbiol, vol.8, issue.8, pp.1441-1448, 2006. ,
URL : https://hal.archives-ouvertes.fr/hal-00198901
Ultrastructural, biochemical, and immunological characterization of two populations of the mytilid mussel Bathymodiolusazoricus from the mid-Atlantic ridge: evidence for a dual symbiosis, Mar Biol, vol.141, issue.6, pp.1035-1078, 2002. ,
Characterization of symbiont populations in life-history stages of mussels from chemosynthetic environments, Biol Bull, vol.208, issue.2, pp.145-55, 2005. ,
A new genus and five new species of mussels (Bivalvia: Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico, Malacologia, vol.40, pp.63-112, 1998. ,
Experimental evidence for filter-feeding by the hydrothermal vent mussel, Bathymodiolus thermophilus. Deep Sea Research Part A Oceanographic Research Papers, vol.38, pp.1455-61, 1991. ,
Mixotrophy in the deep sea: a dual endosymbiotic hydrothermal mytilid assimilates dissolved and particulate organic matter, Mar Ecol Prog Ser, vol.405, pp.187-201, 2010. ,
Experimentally induced endosymbiont loss and re-acquirement in the hydrothermal vent bivalve Bathymodiolus azoricus, J Exp Mar Biol Ecol, vol.318, issue.1, pp.99-110, 2005. ,
Metabolic and physiological interdependencies in the Bathymodiolus azoricus symbiosis, The ISME journal, vol.11, issue.2, p.463, 2017. ,
Multiple i-type lysozymes in the hydrothermal vent mussel Bathymodiolus azoricus and their role in symbiotic plasticity, PLoS One, vol.11, issue.2, p.148988, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01278598
Identification and gene expression of multiple peptidoglycan recognition proteins (PGRPs) in the deep-sea mussel Bathymodiolus azoricus, Comp Biochem Physiol B, vol.207, pp.1-8, 2017. ,
High-throughput sequencing and analysis of the gill tissue transcriptome from the deep-sea hydrothermal vent mussel Bathymodiolus azoricus, BMC Genomics, vol.11, issue.1, p.559, 2010. ,
Postcapture immune gene expression studies in the deep-sea hydrothermal vent mussel Bathymodiolus azoricus acclimatized to atmospheric pressure, Fish & shellfish immunology, vol.42, issue.1, pp.159-70, 2015. ,
Immune function keeps endosymbionts under control, J Biol, vol.7, issue.8, p.28, 2008. ,
Toll-like receptors, Annu Rev Immunol, vol.21, issue.1, pp.335-76, 2003. ,
Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels, Elife, 2015. ,
, BMC Genomics, vol.20, p.109, 2019.
Apoptosis and parasitism: from the parasite to the host immune response, Adv Parasitol, vol.49, pp.133-63, 2001. ,
Respiratory metabolism: glycolysis, the TCA cycle and mitochondrial electron transport, Curr Opin Plant Biol, vol.7, issue.3, pp.254-61, 2004. ,
The citric acid cycle. Science, Technology and Management, vol.5, 1937. ,
Enzyme relationships in a sorbitol pathway that bypasses glycolysis and pentose phosphates in glucose metabolism, Proc Natl Acad Sci, vol.80, issue.4, pp.901-906, 1983. ,
Genetic basis of proteome variation in yeast, Nat Genet, vol.39, issue.11, p.1369, 2007. ,
System-wide molecular evidence for phenotypic buffering in Arabidopsis, Nat Genet, vol.41, issue.2, p.166, 2009. ,
Integrated genomic and proteomic analyses of gene expression in mammalian cells, Mol Cell Proteomics, vol.3, issue.10, pp.960-969, 2004. ,
The proteomic response of the reef coral Pocillopora acuta to experimentally elevated temperatures, PLoS One, vol.13, issue.1, p.192001, 2018. ,
Dual-compartmental transcriptomic+ proteomic analysis of a marine endosymbiosis exposed to environmental change, Mol Ecol, vol.25, issue.23, pp.5944-58, 2016. ,
, Lallier FH: BIOBAZ 2013 cruise, RV Pourquoi pas ? In, 2013.
MOMARSAT2013 cruise, RV Pourquoi pas ? In, 2013. ,
Subseafloor phase equilibria in high-temperature hydrothermal fluids of the lucky strike seamount (mid-Atlantic ridge, 37 17? N), Geochim Cosmochim Acta, vol.90, pp.303-325, 2012. ,
The geochemical controls on vent fluids from the lucky strike vent field, mid-Atlantic ridge, Earth Planet Sci Lett, vol.160, issue.3-4, pp.521-557, 1998. ,
Total protein extraction with TCA-acetone, Plant Proteomics, pp.1-8, 2007. ,
The consequences of sample pooling in proteomics: an empirical study, Electrophoresis, vol.30, issue.17, pp.2967-75, 2009. ,
In-gel digestion for mass spectrometric characterization of proteins and proteomes, Nat Protoc, vol.1, issue.6, p.2856, 2006. ,
Increasing genomic information in bivalves through new EST collections in four species: development of new genetic markers for environmental studies and genome evolution, Gene, vol.408, issue.1, pp.27-36, 2008. ,
URL : https://hal.archives-ouvertes.fr/halsde-00450595
Myproms, a web server for management and validation of mass spectrometry-based proteomic data, Proteomics, vol.7, issue.15, pp.2553-2559, 2007. ,
Accurate proteomewide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ, Mol Cell Proteomics, vol.13, issue.9, pp.2513-2539, 2014. ,
DOI : 10.1074/mcp.m113.031591
URL : http://www.mcponline.org/content/13/9/2513.full.pdf
Andromeda: a peptide search engine integrated into the MaxQuant environment, J Proteome Res, vol.10, issue.4, pp.1794-805, 2011. ,
MaxQuant enables high peptide identification rates, individualized ppb-range mass accuracies and proteome-wide protein quantification, Nat Biotechnol, vol.26, issue.12, p.1367, 2008. ,
DOI : 10.1038/nbt.1511
Bioconductor: open software development for computational biology and bioinformatics, Genome Biol, vol.5, issue.10, p.80, 2004. ,
Use of within-array replicate spots for assessing differential expression in microarray experiments, Bioinformatics, vol.21, issue.9, pp.2067-75, 2005. ,
TM4 microarray software suite, Methods Enzymol, vol.411, issue.9, pp.134-93, 2006. ,
DOI : 10.1016/s0076-6879(06)11009-5
PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium, Nucleic Acids Research, vol.38, issue.suppl_1, pp.204-214, 2009. ,
PANTHER: a library of protein families and subfamilies indexed by function, Genome Res, vol.13, issue.9, pp.2129-2170, 2003. ,
KEGG as a reference resource for gene and protein annotation, Nucleic Acids Res, vol.44, issue.D1, pp.457-62, 2015. ,