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Genetic drivers of chromosomal integron stability

Egill Richard , Baptiste Darracq , Eloi Littner , Claire Vit , Clémence Whiteway , et al.
2022
Pré-publication, Document de travail pasteur-03824759v1
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Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits

David Goudenège , Yannick Labreuche , Evelyne Krin , Dominique Ansquer , Sophie Mangenot , et al.
The International Society of Microbiologial Ecology Journal, 2013, Integrated genomics and post-genomics approaches in microbial ecology, 7 (10), pp.1985-1996. ⟨10.1038/ismej.2013.90⟩
Article dans une revue pasteur-01699814v1
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Cassette recombination dynamics within chromosomal integrons are regulated by toxin-antitoxin systems

Egill Richard , Baptiste Darracq , Eloi Littner , Claire Vit , Clémence Whiteway , et al.
Science Advances , 2024, 10 (2), pp.eadj3498. ⟨10.1126/sciadv.adj3498⟩
Article dans une revue hal-04397951v1
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Chromosomal Integrons are Genetically and Functionally Isolated Units of Genomes

Paula Blanco , Filipa Trig da Roza , Laura Toribio-Celestino , Lucía García-Pastor , Niccolò Caselli , et al.
2023
Pré-publication, Document de travail pasteur-04305666v1
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Integron cassettes commonly integrate into bacterial genomes via widespread non-classical attG sites

Céline Loot , Gael A Millot , Egill Richard , Eloi Littner , Claire Vit , et al.
Nature Microbiology, 2024, 9 (1), pp.228-240. ⟨10.1038/s41564-023-01548-y⟩
Article dans une revue pasteur-04384854v1
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Decrypting the Vibrio cholerae crtS site and its role on the coordinated replication of the two chromosomes

Francisco de Lemos Martins
Genetics. Sorbonne Université, 2018. English. ⟨NNT : 2018SORUS126⟩
Thèse tel-02926056v1
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RadD Contributes to R-Loop Avoidance in Sub-MIC Tobramycin

Veronica Negro , Evelyne Krin , Sebastian Aguilar Pierlé , Thibault Chaze , Quentin Giai Gianetto , et al.
mBio, 2019, 10 (4), pp.e01173-19. ⟨10.1128/mBio.01173-19⟩
Article dans une revue pasteur-02171194v1
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Interplay between Sublethal Aminoglycosides and Quorum Sensing: Consequences on Survival in V. cholerae

André Carvalho , Evelyne Krin , Chloé Korlowski , Didier Mazel , Zeynep Baharoglu
Cells, 2021, 10 (11), pp.3227. ⟨10.3390/cells10113227⟩
Article dans une revue pasteur-03443810v2
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A new route for integron cassette dissemination among bacterial genomes

Céline Loot , Gael A Millot , Egill Richard , Claire Vit , Baptiste Darracq , et al.
2022
Pré-publication, Document de travail pasteur-03826688v1
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Sleeping ribosomes: bacterial signaling triggers RaiA mediated persistence to aminoglycosides

Manon Lang , Evelyne Krin , Chloé Korlowski , Odile Sismeiro , Hugo Varet , et al.
iScience, 2021, pp.103128. ⟨10.1016/j.isci.2021.103128⟩
Article dans une revue pasteur-03349141v1
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Cell cycle-coordinated maintenance of the Vibrio bipartite genome

Théophile Niault , Jakub Czarnecki , Morgan Lambérioux , Didier Mazel , Marie-Eve Val
EcoSal Plus, 2023, 11 (1), eesp00082022. ⟨10.1128/ecosalplus.esp-0008-2022⟩
Article dans une revue hal-04653967v1
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The coordinated replication of Vibrio cholerae ’s two chromosomes required the acquisition of a unique domain by the RctB initiator

Florian Fournes , Theophile Niault , Jakub Czarnecki , Alvise Tissier-Visconti , Didier Mazel , et al.
Nucleic Acids Research, 2021, 49 (19), pp.11119-11133. ⟨10.1093/nar/gkab903⟩
Article dans une revue hal-03500868v1
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VchM - a DNA cytosine methyltransferase modulates the response of Vibrio cholerae to proteotoxic stress

André Carvalho
Molecular biology. Sorbonne Université, 2021. English. ⟨NNT : 2021SORUS080⟩
Thèse tel-03521003v1
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The emergence of Vibrio pathogens in Europe: ecology, evolution, and pathogenesis (Paris, 11-12th March 2015).

Frédérique Le Roux , K Mathias Wegner , Craig Baker-Austin , Luigi Vezzulli , Carlos R Osorio , et al.
Frontiers in Microbiology, 2015, 6, pp.830. ⟨10.3389/fmicb.2015.00830⟩
Article dans une revue hal-01464526v1
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Exploring a unique class of flavoenzymes: Identification and biochemical characterization of ribosomal RNA dihydrouridine synthase

Sabrine Toubdji , Quentin Thullier , Lea-Marie Kilz , Virginie Marchand , Yifeng Yuan , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (32), pp.e2401981121. ⟨10.1073/pnas.2401981121⟩
Article dans une revue hal-04734945v1

Integron Identification in Bacterial Genomes and Cassette Recombination Assays

Claire Vit , Céline Loot , José Antonio Escudero , Aleksandra Nivina , Didier Mazel
Fernando de la Cruz. Horizontal Gene Transfer : methods and protocols, 2075, Springer, pp.189-208, 2019, Methods in Molecular Biology, 978-1-4939-9877-7 (online ISBN). ⟨10.1007/978-1-4939-9877-7_14⟩
Chapitre d'ouvrage hal-02346783v1
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A single regulatory gene is sufficient to alter Vibrio aestuarianus pathogenicity in oysters

David Goudenège , Marie Agnès Travers , Astrid Lemire , Philippe Haffner , Yannick Labreuche , et al.
Environmental Microbiology, 2015, 17 (11), pp.4189-4199. ⟨10.1111/1462-2920.12699⟩
Article dans une revue hal-01444897v1
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Étude du mécanisme de synchronisation de la réplication des deux chromosomes de Vibrio cholerae

Théophile Niault
Biochimie [q-bio.BM]. Sorbonne Université, 2023. Français. ⟨NNT : 2023SORUS121⟩
Thèse tel-04142724v1
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Sedentary chromosomal integrons as biobanks of bacterial anti-phage defence systems

Baptiste Darracq , Eloi Littner , Manon Brunie , Julia Bos , Pierre Alexandre Kaminski , et al.
2024
Pré-publication, Document de travail hal-04783441v1
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Unbridled Integrons: A Matter of Host Factors

Egill Richard , Baptiste Darracq , Céline Loot , Didier Mazel
Cells, 2022, Special Issue "DNA Repair, Genome Stability/Diversity, and Oxidative Stress and Aging, from Bacteria to Human Cells: A Themed Issue in Honor of Prof. Miroslav Radman", 11 (6), pp.925. ⟨10.3390/cells11060925⟩
Article dans une revue pasteur-03610347v1
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Comprehensive Functional Analysis of the 18 Vibrio cholerae N16961 Toxin-Antitoxin Systems Substantiates Their Role in Stabilizing the Superintegron.

Naeem Iqbal , Anne-Marie Guérout , Evelyne Krin , Frédérique Le Roux , Didier Mazel
Journal of Bacteriology, 2015, 197 (13), pp.2150-9. ⟨10.1128/JB.00108-15⟩
Article dans une revue pasteur-01163269v1
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RavA‐ViaA antibiotic response is linked to Cpx and Zra2 envelope stress systems in Vibrio cholerae

Evelyne Krin , André Carvalho , Manon Lang , Anamaria Babosan , Didier Mazel , et al.
Microbiology Spectrum, 2023, 11 (6), pp.e01730-23. ⟨10.1128/spectrum.01730-23⟩
Article dans une revue pasteur-04260034v1
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Belt and braces: Two escape ways to maintain the cassette reservoir of large chromosomal integrons

Egill Richard , Baptiste Darracq , Eloi Littner , Gael Millot , Valentin Conte , et al.
PLoS Genetics, 2024, 20 (4), pp.e1011231. ⟨10.1371/journal.pgen.1011231⟩
Article dans une revue pasteur-04305445v1
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Structure-specific DNA recombination sites: Design, validation, and machine learning–based refinement

Aleksandra Nivina , Maj Svea Grieb , Céline Loot , David Bikard , Jean Cury , et al.
Science Advances , 2020, 6 (30), pp.eaay2922. ⟨10.1126/sciadv.aay2922⟩
Article dans une revue hal-03084479v1