Genomewide association study of Parkinson's disease clinical biomarkers in 12 longitudinal patients' cohorts - Sorbonne Université
Journal Articles Movement Disorders Year : 2019

Genomewide association study of Parkinson's disease clinical biomarkers in 12 longitudinal patients' cohorts

Jonggeol Kim
  • Function : Author
Samantha Hutten
  • Function : Author
Khanh‐dung Nguyen
  • Function : Author
Kirsten Scott
  • Function : Author
Kumaraswamy Naidu Chitrala
  • Function : Author
Aaron Day-Williams
  • Function : Author
Alexis Brice
Guido Alves
  • Function : Author
Alastair Noyce
  • Function : Author
Ole‐bjørn Tysnes
  • Function : Author
Jonathan Evans
  • Function : Author
David Breen
  • Function : Author
Karol Estrada
  • Function : Author
Claire Wegel
  • Function : Author
David Simon
  • Function : Author
Ole Andreassen
  • Function : Author
Bernard Ravina
  • Function : Author
Mathias Toft
  • Function : Author
Peter Heutink
  • Function : Author
Bastiaan Bloem
  • Function : Author
Daniel Weintraub
  • Function : Author
Roger Barker
  • Function : Author
Caroline Williams-Gray
  • Function : Author
Bart van de Warrenburg
  • Function : Author
Jacobus van Hilten
  • Function : Author
Clemens Scherzer
  • Function : Author
Andrew Singleton
  • Function : Author
Mike Nalls
  • Function : Author

Abstract

Abstract Background Several reports have identified different patterns of Parkinson's disease progression in individuals carrying missense variants in GBA or LRRK2 genes. The overall contribution of genetic factors to the severity and progression of Parkinson's disease, however, has not been well studied. Objectives To test the association between genetic variants and the clinical features of Parkinson's disease on a genomewide scale. Methods We accumulated individual data from 12 longitudinal cohorts in a total of 4093 patients with 22,307 observations for a median of 3.81 years. Genomewide associations were evaluated for 25 cross‐sectional and longitudinal phenotypes. Specific variants of interest, including 90 recently identified disease‐risk variants, were also investigated post hoc for candidate associations with these phenotypes. Results Two variants were genomewide significant. Rs382940(T>A), within the intron of SLC44A1 , was associated with reaching Hoehn and Yahr stage 3 or higher faster (hazard ratio 2.04 [1.58–2.62]; P value = 3.46E‐8). Rs61863020(G>A), an intergenic variant and expression quantitative trait loci for α‐2A adrenergic receptor, was associated with a lower prevalence of insomnia at baseline (odds ratio 0.63 [0.52–0.75]; P value = 4.74E‐8). In the targeted analysis, we found 9 associations between known Parkinson's risk variants and more severe motor/cognitive symptoms. Also, we replicated previous reports of GBA coding variants (rs2230288: p.E365K; rs75548401: p.T408M) being associated with greater motor and cognitive decline over time, and an APOE E4 tagging variant (rs429358) being associated with greater cognitive deficits in patients. Conclusions We identified novel genetic factors associated with heterogeneity of Parkinson's disease. The results can be used for validation or hypothesis tests regarding Parkinson's disease. © 2019 International Parkinson and Movement Disorder Society

Dates and versions

hal-04578944 , version 1 (17-05-2024)

Identifiers

Cite

Hirotaka Iwaki, Cornelis Blauwendraat, Hampton Leonard, Jonggeol Kim, Ganqiang Liu, et al.. Genomewide association study of Parkinson's disease clinical biomarkers in 12 longitudinal patients' cohorts. Movement Disorders, 2019, 34 (12), pp.1839-1850. ⟨10.1002/mds.27845⟩. ⟨hal-04578944⟩
13 View
0 Download

Altmetric

Share

More