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3D genome reconstruction from chromosomal contacts
Annick Lesne
,
Julien Riposo
,
Paul Roger
,
Axel Cournac
,
Julien Mozziconacci
Article dans une revue
hal-02324120v1
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Filling the gap: Micro-C accesses the nucleosomal fiber at 100-1000 bp resolution.
Julien Mozziconacci
,
Romain Koszul
Article dans une revue
pasteur-01420328v1
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Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins
Virginia S. Lioy
,
Axel Cournac
,
Martial Marbouty
,
Stéphane Duigou
,
Julien Mozziconacci
,
et al.
Article dans une revue
hal-02180787v1
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Plasmodium falciparum population dynamics in a cohort of pregnant women in Senegal
Juliette Guitard
,
Pernille Andersen
,
Caroline Ermont
,
Sédami Gnidehou
,
Nadine Fievet
,
et al.
Article dans une revue
hal-03962282v1
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Characterizing meiotic chromosomes' structure and pairing using a designer sequence optimized for Hi‐C
Héloise Muller
,
Vittore F Scolari
,
Nicolas Agier
,
Aurele Piazza
,
Agnès Thierry
,
et al.
Article dans une revue
hal-01890095v1
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Nucleosome positioning on large tandem DNA repeats of the ’601’ sequence engineered in Saccharomyces cerevisiae
Astrid Lancrey
,
Alexandra Joubert
,
Evelyne Duvernois-Berthet
,
Etienne Routhier
,
Saurabh Raj
,
et al.
Article dans une revue
hal-03343705v2
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Computer vision for pattern detection in chromosome contact maps
Cyril Matthey-Doret
,
Lyam Baudry
,
Axel Breuer
,
Rémi Montagne
,
Nadège Guiglielmoni
,
et al.
Article dans une revue
pasteur-03263561v1
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High-quality genome (re)assembly using chromosomal contact data
Hervé Marie-Nelly
,
Martial Marbouty
,
Axel Cournac
,
Jean-François Flot
,
Gianni Liti
,
et al.
Article dans une revue
hal-01138788v1
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Generation and Analysis of Chromosomal Contact Maps of Yeast Species.
Axel Cournac
,
Martial Marbouty
,
Julien Mozziconacci
,
Romain Koszul
Article dans une revue
pasteur-01419912v1
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3D organization of synthetic and scrambled chromosomes
Guillaume Mercy
,
Julien Mozziconacci
,
Vittore F Scolari
,
Kun Yang
,
Guanghou Zhao
,
et al.
Article dans une revue
pasteur-01523221v1
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Sir3 mediates long-range chromosome interactions in budding yeast
Myriam Ruault
,
Vittore F Scolari
,
Luciana Lazar-Stefanita
,
Antoine Hocher
,
Isabelle Loïodice
,
et al.
Article dans une revue
hal-03169421v1
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Chromosome-level genome assembly reveals homologous chromosomes and recombination in asexual rotifer Adineta vaga
Paul Simion
,
Jitendra Narayan
,
Antoine Houtain
,
Alessandro Derzelle
,
Lyam Baudry
,
et al.
Article dans une revue
hal-03406292v1
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Purification of G1 daughter cells from different Saccharomycetes species through an optimized centrifugal elutriation procedure.
Martial Marbouty
,
Caroline Ermont
,
Bernard Dujon
,
Guy-Franck Richard
,
Romain Koszul
Article dans une revue
pasteur-01420008v1
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A predictive computational model of the dynamic 3D interphase yeast nucleus.
Hua Wong
,
Hervé Marie-Nelly
,
Sébastien Herbert
,
Pascal Carrivain
,
Hervé Blanc
,
et al.
Article dans une revue
pasteur-01420017v1
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Tethering of molecular parasites on inactive chromatin in eukaryote nucleus
Fabien Girard
Thèse
tel-04524712v1
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Investigating chromosome dynamics through Hi-C assembly
Lyam Baudry
Thèse
tel-02935877v1
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Absence of chromosome axis protein recruitment prevents meiotic recombination chromosome-wide in the budding yeast Lachancea kluyveri
Sylvain Legrand
,
Asma Saifudeen
,
Hélène Bordelet
,
Julien Vernerey
,
Arnaud Guille
,
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (12), pp.e2312820121. ⟨10.1073/pnas.2312820121⟩
Article dans une revue
pasteur-04603593v1
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Chromosome folding and prophage activation reveal specific genomic architecture for intestinal bacteria
Quentin Lamy-Besnier
,
Amaury Bignaud
,
Julian R Garneau
,
Marie Titecat
,
Devon E Conti
,
et al.
Article dans une revue
pasteur-04158849v1
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Generation of a Metagenomics Proximity Ligation 3C Library of a Mammalian Gut Microbiota
Théo Foutel-Rodier
,
Agnès Thierry
,
Romain Koszul
,
Martial Marbouty
High-Density Sequencing Applications in Microbial Molecular Genetics, 612, pp.183-195, 2018, Methods in Enzymology, 978-0-12-815993-4. ⟨10.1016/bs.mie.2018.08.001⟩
Chapitre d'ouvrage
pasteur-02866616v1
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Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging.
Martial Marbouty
,
Antoine Le gall
,
Diego I Cattoni
,
Axel Cournac
,
Alan Koh
,
et al.
Article dans une revue
pasteur-01419993v1
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Kinetic Signature of Cooperativity in the Irreversible Collapse of a Polymer
Vittore F Scolari
,
Guillaume Mercy
,
Romain Koszul
,
Annick Lesne
,
Julien Mozziconacci
Article dans une revue
hal-01992814v1
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The silencing factor Sir3 is a molecular bridge that sticks together distant loci
Myriam Ruault
,
Vittore F Scolari
,
Luciana Lazar-Stefanita
,
Antoine Hocher
,
Isabelle Loïodice
,
et al.
2020
Pré-publication, Document de travail
hal-03013702v1
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Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes
Amaury Bignaud
,
Charlotte Cockram
,
Céline Borde
,
Justine Groseille
,
Eric Allemand
,
et al.
Article dans une revue
hal-04468362v1
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L'organisation 3D des chromosomes synthétiques de levure
Guillaume Mercy
Génomique, Transcriptomique et Protéomique [q-bio.GN]. Sorbonne Université, 2018. Français. ⟨NNT : 2018SORUS034⟩
Thèse
tel-02111002v1
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Exploring the genomic complexity of bacterial infection in 3D
Cyril Matthey-Doret
Thèse
tel-03679023v1
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Kinetics of the Severe Acute Respiratory Syndrome Coronavirus 2 Antibody Response and Serological Estimation of Time Since Infection
Stéphane Pelleau
,
Tom Woudenberg
,
Jason Rosado
,
Françoise Donnadieu
,
Laura Garcia
,
et al.
Article dans une revue
pasteur-03319587v2
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Multiplex assays for the identification of serological signatures of SARS-CoV-2 infection: an antibody-based diagnostic and machine learning study
Jason Rosado
,
Stéphane Pelleau
,
Charlotte A. Cockram
,
Sarah Hélène Merkling
,
Narimane Nekkab
,
et al.
Article dans une revue
hal-03128905v1
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Filling annotation gaps in yeast genomes using genome-wide contact maps.
Hervé Marie-Nelly
,
Martial Marbouty
,
Axel Cournac
,
Gianni Liti
,
Gilles Fischer
,
et al.
Article dans une revue
pasteur-01488132v1
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Total synthesis of a functional designer eukaryotic chromosome.
Narayana Annaluru
,
Héloïse Muller
,
Leslie A. Mitchell
,
Sivaprakash Ramalingam
,
Giovanni Stracquadanio
,
et al.
Article dans une revue
pasteur-01420002v1
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Chromosomal assembly of the flat oyster ( Ostrea edulis L.) genome as a new genetic resource for aquaculture
Isabelle Boutet
,
Homère Alves Monteiro
,
Lyam Baudry
,
Takeshi Takeuchi
,
Eric Bonnivard
,
et al.
Article dans une revue
hal-03896508v1
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